Abstract: Now it is absolutely clear, that the majority of proteins in living systems function due to interaction with each other in stable or dynamic proteins complexes. Therefore necessity of deeper studies of proteins functions causes expansion of protein-protein interaction research. In the present review the brief description and comparative estimation of experimental methods and protocols of protein interactomics, based on technology of molecular fishing on an optical chips and paramagnetic nanoparticles is given.
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Reference: Ivanov A.S., Ershov P.V., Mezentsev Yu.V., Poverennaya E.V., Lisitsa A.V., Archakov A.I., Protocols of proteins interactomics: molecular fishing on optical chips and magnetic nanoparticles, Biomeditsinskaya khimiya, 2013, vol: 59(2), 171-182.
3. Cesareni G., Ceol A., Gavrila C., Palazzi L.M., Persico M., Schneider M.V. (2005) FEBS Lett., 579, 1828-1833. CrossRef Scholar google search
4. Pieroni E., de la Fuente van Bentem S., Mancosu G., Capobianco E., Hirt H., de la Fuente A. (2008) Proteomics, 8, 799-816. CrossRef Scholar google search
11. Ershov P., Gnedenko O., Molnar A., Lisitsa A., Ivanov A., Archakov A. (2009) Biochemistry (Moscow). Supplemental Series B: Biomedical Chemistry, 3, 272-288. Scholar google search
13. Park H.R., Cockrell L.M., Du Y., Kasinski A., Havel J., Zhao J., Reyes-Turcu F., Wilkinson K.D., Fu H. (2008) Molecular Biomethods Handbook, Humana Press, Totowa, NJ, 463-494. CrossRef Scholar google search
14. Chatton B., Bahr A., Acker J., Kedinger C. (1995) Biotechniques, 18, 142-145. Scholar google search
17. Jung J.W., Jung S.H., Kim H.S., Yuk J.S., Park J.B., Kim Y.M., Han J.A., Kim P.H., Ha K.S. (2006) Proteomics, 6, 1110-1120. CrossRef Scholar google search
37. Borch J., Roepstorff P. (2006) Mol. Biotechnol., 33, 179–190. Scholar google search
38. Nedelkov D., Nelson R.W. (2003) J. Mol. Recognit., 16, 9–14. Scholar google search
39. Berggеrd T., Linse S., James P. (2007) Proteomics, 7, 2833-2842. Scholar google search
40. Jecklin M.C., Schauer S., Dumelin C.E., Zenobi R. (2009) J. Mol. Recognit., 22, 319-329. Scholar google search
41. Buneeva O., Gnedenko O., Zgoda V., Kopylov A., Glover V., Ivanov A., Medvedev A., Archakov A. (2010) Proteomics, 10, 23-37. CrossRef Scholar google search
42. Nelson R.W., Krone J.R., Jansson O. (1997) Anal. Chem., 69, 4363–4368. Scholar google search
43. Williams C., Addona T.A. (2000) Trends Biotechnol., 18, 45-48. Scholar google search
44. Nedelkov D. (2010) In: Surface Plasmon Resonance: Methods and Protocols, (de Mol N.J., Fischer M.J.E., eds.) Humana Press, London, 261-268. Scholar google search
