1. V. N. Orekhovich Institute of Biomedical Chemistry, Russian Academy Medical Sciences 2. A. N. Belozersky Institute of Physical-Chemical Biology, Moscow State University
HIV-1 integrase is the third enzyme essential for viral replication. It represents an attractive target for new anti HIV drugs. Diketo acids represent the most prospective class of integrase inhibitors; one of them (S1360) is currently under clinical trials. We prepared the training set containing 90 diketoacid in LOO cross-validation for HIV-1 integrase inhibitors was shown to be 99%. We selected eight new potential HIV-1 integrase inhibitors among about the 700.000 substances from the databases of commercially available chemicals; anti-integrase activity was found experimentally in two selected compounds.
Akimov D.V. et al. Computer-aided finding of new HIV-1 integrase inhibitors // Biomeditsinskaya Khimiya. - 2005. - V. 51. -N 3. - P. 335-340.
Akimov D.V. et al., "Computer-aided finding of new HIV-1 integrase inhibitors." Biomeditsinskaya Khimiya 51.3 (2005): 335-340.
Akimov, D. V., Filimonov, D. A., Prikazchikova, T. A., Gottikh, M. B., Poroikov, V. V. (2005). Computer-aided finding of new HIV-1 integrase inhibitors. Biomeditsinskaya Khimiya, 51(3), 335-340.
Patella F.J.J., Delaney K.M., Moorman A.C. (1998) N. Engl. J. Med. 38, 853-860. Scholar google search
Ramratnam B., Mittler J.E., Zhang L., Boden D., Hurley A., Fang E., Macken C.A., Perelson A.S., Markowitz M., Ho D.D. (2000) Nat. Med. , 6, 82-85. Scholar google search
Finzi D., Blankson J., Siliciano J.D., Margolick J.B., Chadwick K., Pierson T., Smith K., Lisziewicz J., Lori E., Flexner C., Quinn T.C., Chaisson R.E., Rosenberg E., Walker В., Gange S., Gallant J., Siliciano R.F. (1999) Nat. Med. , 5, 512-517. Scholar google search
Johnson A.A., Marchand C., Pommier Y. (2004) Curr. Top. Med. Chem., 4, 1059-1077. Scholar google search
Sechi M., Denidas M., Dallocchio R., Dessi A., Bacchi A., Sannia L., Carta E., Palomba M., Ragab O., Chan C., Shoemaker R., Sei S., Dayam R., Neamati N. (2004) J. Med. Chem., 47, 5298-310. Scholar google search
Pais G.C., Zhang X., Marchand C., Neamati N., Cowansage K., Svarovskaia E.S., Pathak V.K., Tang Y., Nicklaus M., Pommier Y., Burke T.R.Jr. (2002) J. Med. Chem., 45, 3184-94. Scholar google search
Hazuda D.J., Felock P., Witmer M., Wolfe A., Stillmock K., Grobler J.A, Espeseth A., Gabryelski L, Schleif W., Blau C., Miller M.D. (2000) Science., 287, 646-650. Scholar google search
Grobler J.A., Stillmock К., Hu В., Witmer M., Felock P., Espeseth A.S., Wolfe A., Egbertson M., Bourgeois M., Melamed J., Wai J.S., Young S., Vacca J., Hazuda D.J. (2002) Proc. Natl. Acad. Sci. USA., 99, 6661-6666. Scholar google search
Marchand C., Zhang X., Pais G.C., Cowansage K., Neamati N., Burke T.R.Jr., Pommier Y. (2002) J. Biol. Chera., 277, 12596-12603. Scholar google search
Long Y.Q., JiangX .H., Dayam R., Sanchez Т., Shoemaker R., Sei S., Neamati N. (2004) J. Med. Chem., 47, 2561-2573. Scholar google search
Poroikov V.V., Filimonov D.A. (2002) J. Comput. Aid. Molec. Des., 16, 819-824. Scholar google search
Poroikov V., Filimonov D. (2005) in: Predictive Toxicology (C. Helmaed.) N.Y.: Taylor&Fransis, pp. 459-478. Scholar google search