Irreversible chemical afm-fishing for the detection of low-copied proteins Ivanov Yu.D.1 2 1 1 3 1 2 2 2 1 1 1. Orekhovich institute of biomedical chemistry of the Russian academy of medical sciences2. NRC “Kurchatov institute”3. Joint Institute for High Temperatures of Russian Academy of Sciences Section: DOI: 10.18097/PBMC20146001028 PubMed Id: 24749246
Year: 2014 Volume: 60 Issue : 1 Pages: 28-50Download PDF: Keywords: AFM-fishing, AFM-chip, low-copied proteins
Citation: APA
MLA
BMC standart
GOST
Ivanov Yu.D., Danichev V.V., Pleshakova T.O., Shumov I.D., Ziborov V.S., Krokhin N.V., Zagumenniy M.N., Ustinov V.S., Smirnov L.P., Shironin A.V., Archakov A.I. (2014) Irreversible chemical afm-fishing for the detection of low-copied proteins. Biomeditsinskaya Khimiya, 60 (1), 28-50.
Ivanov Yu.D. et al. Irreversible chemical afm-fishing for the detection of low-copied proteins // Biomeditsinskaya Khimiya. - 2014. - V. 60. -N 1. - P. 28-50.
Ivanov Yu.D. et al., "Irreversible chemical afm-fishing for the detection of low-copied proteins." Biomeditsinskaya Khimiya 60.1 (2014): 28-50.
Ivanov, Yu. D., Danichev, V. V., Pleshakova, T. O., Shumov, I. D., Ziborov, V. S., Krokhin, N. V., Zagumenniy, M. N., Ustinov, V. S., Smirnov, L. P., Shironin, A. V., Archakov, A. I. (2014). Irreversible chemical afm-fishing for the detection of low-copied proteins. Biomeditsinskaya Khimiya , 60(1), 28-50.
This paper is also available as the English translation: 10.1134/S1990750813010071
References Show Myszka D.G., He X., Dembo M., Morton Th.A., Goldstein B. (1998) Biophys. J., 75, 583-594. Scholar google search Schuck P. (1996) Biophys. J., 70, 1230-1249. Scholar google search Goyal D.K., Subramanian A. (2010) Thin Solid Films, 518, 2186-2193. Scholar google search Zubtsov D.A., Savvateeva E.N., Rubina A.Yu., Pun`kov S.V., Konovalova E.V., Moiseeva O.V., Chechetkin V.R., Zasedatelev A.S. (2007) Anal. Biochem., 368, 205-213. Scholar google search Ivanov Yu.D., Kanaeva I.P., Eldarov M.A., Skryabin K.G., Lehnerer M., Schulze J., Hlavica P., Archakov A.I. (1997) Biochem. Mol. Biol. Int., 42, 731-737. Scholar google search Archakov A.I., Ivanov Yu.D. (1998) in: Biophysics of Electron Transfer and Molecular Bioelectronics. Plenum Press, USA, 173-196. Scholar google search Ivanov Yu.D., Kanaeva I.P., Kuznetsov V.Yu., Lehnerer M., Schulze J., Hlavica P., Archakov A.I. (1999) Arch. Biochem. Biophys., 362(1), 87-93. Scholar google search Ivanov Yu.D., Usanov S.A., Archakov A.I. (1999) Biochem. Mol. Biol. Int., 47, 327-336. Scholar google search Koval V.V., Gnedenko O.V., Ivanov Yu.D., Fedorova O.S., Archakov A.I., Knorre D.G. (1999) IUBMB LIFE, 48, 317-320. Scholar google search Morozov S.G., Ivanov Yu.D., Uchaikin V.F., Karazhas N.V., Vahrushina S.V., Gnedenko O.V., Konev V.A., Kovalev O.B., Archakov A.I. (1999) Allergiya, astma i klinicheskaya immunologiya, 9, 187-189. Scholar google search Ivanov Yu.D., Kanaeva I.P., Archakov A.I. (2000) Biochem. Biophys. Res. Commun., 273, 750-752. Scholar google search Ivanov Yu.D., Kanaeva I.P., Karuzina I.P, Archakov A.I., Hui Bon Hoa G., Sligar S.G. (2001) J. of Inorg. Biochem., 391, 255-264. Scholar google search Ivanov Yu.D., Kanaeva I.P., Karuzina I.P, Usanov S.A., Hui Bon Hoa G., Sligar S.G., Archakov A.I. (2001) J. of Inorg. Biochem., 87, 175-184. Scholar google search Ivanov Yu.D., Kanaeva I.P., Gnedenko O.V., Pozdnev V.F., Shumyantseva V.V., Samenkova N.F., Kuznetsova G.P., Tereza A.M., Schmid R.D., Archakov A.I. (2001) J. Mol. Recognit., 14, 185-196. CrossRef Scholar google search Semenova N.V., Ivanov Yu.D., Gnedenko O.V., Konev V.A., Kovalev O.B., Uchaikin V.F., Morozov S.G., Archakov A.I. (2001) Novosti nauki i tehniki. Allergiya, astma i klinicheskaya immunologiya, 1, 183-185. Scholar google search Ivanov Yr.D., Gnedenko O.V., Konev V.A., Kovalev O.B., Nikolaeva L.I., Semenova N.V., Uchaikin V.F., Archakov A.I. (2001) Voprosy meditsinskoi khimii, 47(4), 419-425. Scholar google search Ivanov Yu.D., Panova N.G., Gnedenko O.V., Buneeva O.A., Medvedev A.E., Archakov A.I. (2002) Voprosy meditsinskoi khimii, 48(1), 73-83. Scholar google search Dmitriev D.A,, Massino Yu.S., Segal O.L., Smirnova M.B., Pavlova E.V., Kolyaskina G.I., Gurevich K.G., Gnedenko O.V., Ivanov Yu.D., Archakov A.I. Osipov A.P., Dmitriev A.D., Egorov A.M. (2002) Biohimiya, 67, 1643-1654. Scholar google search Dmitriev D.A., Massino Y.S., Segal O.L., Smirnova M.B., Pavlova E.V., Gurevich K.G., Gnedenko O.V., Ivanov Y.D., Kolyaskina G.I., Archakov A.I., Osipov A.P., Dmitriev A.D., Egorov A.M. (2002) J. Immunol. Methods, 261, 103-118. CrossRef Scholar google search Ivanov Yu.D., Gnedenko O.V., Nikolaeva L.I., Konev V.A., Kovalev O.B., Uchaikin V.F., Govorun V.M., Pokrovskiy V.I., Archakov A.I. (2003) Zhurn. Mikrobiol., №2, 58-62. Scholar google search Momynaliev K.T., Govorun V.M., Gnedenko O.V., Ivanov Yu.D., Archakov A.I. (2003) J. Mol. Recognit., 16, 1-8. Scholar google search Rachenkova N.I., Ivanov Yu.D., Skvortsov V.S., Ivanov A.S., Molnar A.A., Hui Bon Hoa G., Archakov A.I. (2005) Biomeditsinskaya Khimiya, 51, 501-512. Scholar google search Rachenkova N.I., Ivanov Yu.D., Molnar A.A., Archakov A.I. (2005) Biomeditsinskaya Khimiya, 51(6), 617-623. Scholar google search Ivanov Yu.D., Ivanov A.V., Petushkova N.A., Gara O.G., Kuznetsov V.Yu., Podoplelov A.V., Archakov A.I. (2008) Biomeditsinskaya Khimiya, 54(4), 435-444. Scholar google search Ivanov Yu.D., Govorun V.M., Bykov V.A., Archakov A.I. (2006) Proteomics, 6, 1399-1414. CrossRef Scholar google search Gaster R.S., Xu L., Han S.-J., Wilson R.J., Hall D.A., Osterfeld S.J., Yu H., Wang S.X. (2011) Nat. Nanotechnol., 6, 314-320. Scholar google search Archakov A.I., Ivanov Y.D., Lisitsa A.V., Zgoda V.G. (2007) Proteomics, 7, 4-9. CrossRef Scholar google search Archakov A.I., Ivanov Y.D., Lisitsa A.V., Zgoda V.G. (2009) Proteomics, 9, 1326-1343. CrossRef Scholar google search Snyder M. (2011) Encode the Human Parts List, in: HUPO 2011 – 10th World Congress. HPP Plenary Session. Scholar google search Ivanov Yu.D., Uchaikin V.F., Pleshakova T.O., Frantsuzov P.A., Svetlov S.K., Konev V.A., Kovalev O.B., Yastrebova O.N., Sveshnikov P.G., Ulanova T.I., Archakov A.I. (2006) Fiziol. i patol. immun. sist., 10, №12, 11-14. Scholar google search Kaysheva A.L., Ivanov Yu.D., Zgoda V.G., Frantsuzov P.A., Pleshakova T.O., Krohin N.V., Ziborov V.S., Archakov A.I. (2010) Biomeditsinskaya Khimiya, 56(1), 26-39. CrossRef Scholar google search Dexlin-Melby L., Sandstrom A., Antberg L., Gumarsson J., Hansson S.R., Borrebaeck C.A.K., Wingren C. (2011) Proteomics, 11, 1550-1554. Scholar google search Stern E., Vacic A., Rajan N.K., Criccione J.M., Park J., Ilic B.R., Mooney D.J., Reed M.A., Fahmy T.M. (2010) Nat. Nanotechnol., 5, 138-142. Scholar google search Zheng G., Gao X.P.A., Lieber C.M. (2010) Nano Lett., 10, 3179-3183. Scholar google search Kiselyova O.I., Yaminsky I.V., Ivanov Yu.D., Kanaeva I.P., Kuznetsov V.Yu., Archakov A.I. (1999) Arch. Biochem. Biophys, 371, 1-7. Scholar google search Kuznetsov V.Yu., Ivanov Yu.D., Bykov V.A., Saunin S.A., Fedorov I.A., Lemeshko S.V., Hui Bon Hoa, Archakov A.I. (2002) Proteomics, 2, 1699-1705. Scholar google search Archakov A.I., Ivanov Y.D. (2002) Methods Enzymol., 357, 94-103. Scholar google search Kuznetsov V.Yu., Ivanov Yu.D., Archakov A.I. (2004) Proteomics, 4, 2390-2396. CrossRef Scholar google search Archakov A.I., Ivanov Yu.D. (2007) Mol. Biosyst., 3, 336-342. Scholar google search Medvedeva N.V., Ipatova O.M., Ivanov Yu.D., Drozhzhin A.I., Archakov A.I. (2007) Biochemistry (Moscow) Suppl. Series B: Biomedical Chemistry, 1, 114-124. Scholar google search Ivanov Y.D., Frantsuzov P.A., Ivanov A.V., Bykov V.A., Besedin S., Hui Bon Hoa, Archakov A.I. (2010) Anal. Methods, 2, 688-693. CrossRef Scholar google search Ivanov Y.D., Frantsuzov P.A., Zöllner A, Medvedeva N.V., Archakov A.I., Reinle W., Bernhardt R. (2011) Nanoscale Res. Lett., 6, 54. Scholar google search Limanskaya L.A., Limanskiy A.P. (2006) Bioorgan. himiya, 32, 1-17. Scholar google search Vijayendran R.A., Ligler F.S., Leckband D.E. (1999) Anal. Chem., 71, 5405-5412. CrossRef Scholar google search Ramsden J.J., Bachmanova G.I., Archakov A.I. (1996) Biosens. Bioelectron., 11(5), 523-528. CrossRef Scholar google search Levich V.G. (1959) Fiziko-himicheskaya gidrodinamika, Gos. Izd-vo fiziko-matematicheskoy literatury, M. Scholar google search Zheng G., Patolsky F., Cui Y., Wang W.U., Lieber C.M. (2005) Nature Biotechnol., 23, 1294-1301. CrossRef Scholar google search Kim A. et al. (2007) Appl. Phys. Lett., 91, 103901. CrossRef Scholar google search Cai D., Ren L., Zhao H., Xu C., Zhang L., Yu Y., Wang H., Lan Y., Roberts M.F., Chuang J.H., Naughton M.J., Ren Z., Chiles T.C. (2010) Nat. Nanotechnol., 5, 597-601. CrossRef Scholar google search Hermanson G.T. (2008) Bioconjugate Techniques, Acad. Press, 2008, 1060 p. Scholar google search Mattson G., Conklin E., Desai S., Nielander G., (1993) Mol. Boil. Reports, 17, 167-183. CrossRef Scholar google search Ivanov Yu.D., Buharina N.S., Frantsuzov P.A., Pleshakova T.O., Munro A.V., Huey Bon Hoa G., Archakov A.I. (2010) Nanotehnologii i ohrana zdorovia, II(1), 30-35. Scholar google search Braga P.C., Ricci D. (2003) Methods in Molecular Biology, 242, Atomic Force Microscopy. BiologyBiomedical Methods and Applications. Humana Press, NJ, 382 p. CrossRef Scholar google search Huff J., Lynch M.P., Nettikadan S., Johnson J.C. (2004) J. Biol. Screening, 9, 491-497. CrossRef Scholar google search Ramacviciene A., Snitka V., Mieliauskiene R., Ramanavicius A. (2006) Cent. Eur. J. Chem., 4(1), 194-206. Scholar google search Medvedeva N.V., Ipatova O.M., Ivanov Yu.D., Drozhzhin A.I., Archakov A.I. (2006) Biomeditsinskaya Khimiya, 52(6), 529-546. Scholar google search Archakov A.I., Ivanov Yu.D. (2011) Biochim. Biophys. Acta, 1814, 102-110. CrossRef Scholar google search Calabro M.A., Katz J.T., Holloway P.W. (1976) J. Biol. Chem., 251, 2113-2118. Scholar google search Green N.M. (1964) Biochem. J., 92, 16C-17C. CrossRef Scholar google search Haifeng L., Yuwen L., Xiaomin C., Zhiyong W., Cunxin W. (2008) J. Therm. Anal. Calorim., 93, 569–574. CrossRef Scholar google search Davies P.S., Rennke H.G., Cotran R.S. (1981) J. Cell. Sci., 49, 69-86. Scholar google search Haniu M., Armes L.G., Yasunobu K.T., Shastry B.A., Gunsalus I.C. (1982) J. Biol. Chem., 257, 12664-12671. Scholar google search Chu J.-W., Kimura T. (1973) J. Biol. Chem., 248, 2089-2094. Scholar google search Unger B.P., Gunsalus I.C., Sligar S.G. (1986) J. Biol. Chem., 261, 1158-1163. Scholar google search Bussolati G., Gugliotta P. (1983) J. Histochem. Cytochem., 31, 1419-1421. Scholar google search Xialing C., Lin M. (2009) J. Biochem. Tech., 1, 92-95. Scholar google search Loitsyanskiy L.G. (1978) Mehanika zhidkosti i gaza, Nauka, M. Scholar google search Danichev V.V., Zagumenniy M.N., Smirnov L.P. (2006) Trudy Chetvertoy Rossiyskoy nacional'noy konferencii po teploobmenu, 3, Izdatel'skiy dom MEI, M., c. 219-222. Scholar google search Patankar S. (1984) Chislennye metody resheniya zadach teploobmena i dinamiki zhidkosti, Energoatomizdat, M. Scholar google search Wu H., Patterson G.K. (1989) Chem. Eng. Sci., 44, 2207-2221. Scholar google search Danichev V.V., Zagumenniy M.N., Kartasheva E.L., Fedushkin A.I. (2005) Trudy Vtoroy Rossiyskoy konferencii “Teplomassoobmen i gidrodinamika v zakruchennyh potokah”, 15-17 marta 2005 g. Moskva, MEI (elektronniy resurs). Scholar google search Lapin Yu.V., Garbaruk A.V., Strelets M.H. (2004) Nauchno-tehnicheskie vedomosti, 2, 1-31. Scholar google search Prigozhin I., Defey R. (1966) Himicheskaya termodinamika (per. s angl.), Nauka, Novosibirsk. Scholar google search
