Metabolomics is one of the omics sciences, the technologies of which are widely used today in many life sciences. Its application influenced the discovery of new biomarkers of diseases, the description of biochemical processes occurring in many organisms, laid the basis for a new generation of clinical laboratory diagnostics. The purpose of this review is to show how metabolomics is represented in the studies of Russian scientists, to demonstrate the main directions and achievements of the Russian science in this field. The review also highlights the history of metabolomics, existing problems and the place of Russian metabolomics in their solution.
Download PDF:
Keywords: metabolomics, mass spectrometry, Russian science, Institute of Biomedical Chemistry, diagnosis of diseases
Citation:
Lokhov P.G., Balashova E.E., Trifonova O.P., Maslov D.L., Archakov A.I. (2020) Ten years of the Russian metabolomics: history of development and achievements. Biomeditsinskaya Khimiya, 66(4), 279-293.
Lokhov P.G. et al. Ten years of the Russian metabolomics: history of development and achievements // Biomeditsinskaya Khimiya. - 2020. - V. 66. -N 4. - P. 279-293.
Lokhov P.G. et al., "Ten years of the Russian metabolomics: history of development and achievements." Biomeditsinskaya Khimiya 66.4 (2020): 279-293.
Lokhov, P. G., Balashova, E. E., Trifonova, O. P., Maslov, D. L., Archakov, A. I. (2020). Ten years of the Russian metabolomics: history of development and achievements. Biomeditsinskaya Khimiya, 66(4), 279-293.
Smith C.A., O'Maille G., Want E.J., Qin C., Trauger S.A., Brandon T.R., Custodio D.E., Abagyan R., Siuzdak G. (2005) Therapeutic Drug Monitoring, 27, 747-751. CrossRef Scholar google search
Beger R.D., Dunn W.B., Bandukwala A., Bethan B., Broadhurst D., Clish C.B., Dasari S., Derr L., Evans A., Fischer S., Flynn T., Hartung T., Herrington D., Higashi R., Hsu P.C., Jones C., Kachman M., Karuso H., Kruppa G., Lippa K., Maruvada P., Mosley J., Ntai I., O'Donovan C., Playdon M., Raftery D., Shaughnessy D., Souza A., Spaeder T., Spalholz B., Tayyari F., Ubhi B., Verma M., Walk T., Wilson I., Witkin K., Bearden D.W., Zanetti K.A. (2019) Metabolomics, 15, DOI: 10.1007/s11306-018-1460-7. CrossRef Scholar google search
Beale D.J., Pinu F.R., Kouremenos K.A., Poojary M.M., Narayana V.K., Boughton B.A., Kanojia K., Dayalan S., Jones O.A.H., Dias D.A. (2018) Metabolomics, 14, DOI: 10.1007/s11306-018-1449-2. CrossRef Scholar google search
Savolainen O., Fagerberg B., Lind M.V., Sandberg A.S., Ross A.B., Bergström G. (2017) PLoS One, 12, DOI: 10.1371/journal.pone.0177738. CrossRef Scholar google search
Liu J., Semiz S., van der Lee S.J., van der Spek A., Verhoeven A., van Klinken J.B., Sijbrands E., Harms A.C., Hankemeier T., van Dijk K.W., van Duijn C.M., Demirkan A. (2017) Metabolomics, 13, DOI: 10.1007/s11306-017-1239-2. CrossRef Scholar google search
van den Berg R.A., Hoefsloot H.C.J., Westerhuis J.A., Smilde A.K., van der Werf M.J. (2006) BMC Genomics, 7, DOI: 10.1186/1471-2164-7-142. CrossRef Scholar google search
Smilde A.K., Jansen J.J., Hoefsloot H.C.J., Lamers R.J.A.N., van der Greef J., Timmerman M.E. (2005) Bioinformatics, 21, 3043-3048. CrossRef Scholar google search
Vis D.J., Westerhuis J.A., Smilde A.K., van der Greef J. (2007) BMC Bioinformatics, 8, DOI: 10.1186/1471-2105-8-322. CrossRef Scholar google search
Jonsson P., Bruce S.J., Moritz T., Trygg J., Sjöström M., Plumb R., Granger J., Maibaum E., Nicholson J.K., Holmes E., Antti H. (2005) Analyst, 130, 701-707. CrossRef Scholar google search
Westergren A., Karlsson S., Andersson P., Ohlsson O., Hallberg I.R. (2001) J. Clin. Nurs., 10, 257-267. CrossRef Scholar google search
Broeckling C.D., Reddy I.R., Duran A.L., Zhao X., Sumner L.W. (2006) Anal. Chem., 78, 4334-4341. CrossRef Scholar google search
Baran R., Kochi H., Saito N., Suematsu M., Soga T., Nishioka T., Robert M., Tomita M. (2006) BMC Bioinformatics, 7, DOI: 10.1186/1471-2105-7-530. CrossRef Scholar google search
Denkert C., Budczies J., Weichert W., Wohlgemuth G., Scholz M., Kind T., Niesporek S., Noske A., Buckendahl A., Dietel M., Fiehn O. (2008) Mol. Cancer, 7, DOI: 10.1186/1476-4598-7-72. CrossRef Scholar google search
Moshkovskii S., Pyatnitsky M., Lokhov P., Baranova A. (2015) in: Biomarkers in Disease: Methods, Discoveries and Applications: Biomarkers in Cancer (Preedy V.R. and Patel V.B., eds.) Springer Nature Switzerland AG, pp. 3-30. CrossRef Scholar google search
Kokova D., Verhoeven A., Perina E.A., Ivanov V.V., Knyazeva E.M., Saltykova I.V., Mayboroda O.A. (2020) PLoS Negl. Trop. Dis., 14, e0008015. CrossRef Scholar google search
Puzanskiy R.K., Yemelyanov V.V., Gavrilenko T.A., Shishova M.F. (2017) Vavilovskii Zhurnal Genetiki i Selektsii, 21(1), 112-123. CrossRef Scholar google search
Puzanskiy R.K., Yemelyanov V.V., Shishova M.F. (2018) Sel'skokhozyaistvennaya Biologiya, 53, 15-28. CrossRef Scholar google search
Puzanskiy R.K., Yemelyanov V.V., Shavarda A.L., Gavrilenko T.A., Shishova M.F. (2018) Fiziologiya Rasteniy, 65(6), 451-462. CrossRef Scholar google search
Shishova M., Puzanskiy R., Gavrilova O., Kurbanniazov S., Demchenko K., Yemelyanov V., Pendinen G., Shavarda A., Gavrilenko T. (2019) Metabolites, 9, DOI: 10.3390/metabo9020024. CrossRef Scholar google search
He Y., Yu Z., Giegling I., Xie L., Hartmann A.M., Prehn C., Adamski J., Kahn R., Li Y., Illig T., Wang-Sattler R., Rujescu D. (2012) Transl. Psychiatry, 2, e149. CrossRef Scholar google search
Gorbunova V., Seluanov A., Zhang Z., Gladyshev V.N., Vijg J. (2014) Nat. Rev. Genet., 15, 531-540. CrossRef Scholar google search
